CFDE Use Case Library
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Introduction
Use Cases
Objectives
Personas
Tasks
Requirements
CFDE Use Case Library
Introduction
Use Cases
Use Cases
Researcher Browse and Filter
Explore data availability to build policy
Monitor Data Releases as a Data Custodian
Create a Data Release
Researcher Browse and Filter Complex
Gathering blood cancer data sets
Compiling datasets of movement related disorders
DCC validates data
Review CFDE portal submissions
Approve a Review Catalog for use by the CFDE
Create a new version of the CFDE public catalog
Objectives
Objectives
Multi DCC Comparison
Create Data Release
Discover Datasets
Monitor Data Release
Data Usage Statistics
View a Review Catalog
Personas
Personas
Clinical Researcher
CFDE Clinical Researcher
Data Administrator
Data Custodian
Data Scientist
NIH Program Officer
CFDE CC Team Member
Tasks
Tasks
Access CFDE interface
Use link within the CFDE interface to access original data source
Export a file of results
Search within dataset descriptions
Search/filter data by assay type terms
Search/filter data sets by anatomic terms
Summarize datatypes hosted by CF Program X
Summarize FAIRness scores by CF Program X over time
Summarize FAIRness scores by CF Program X
Visualize a table of all datasets that match query
Search/filter CF Programs by anatomic terms
Search/filter CF Programs by assay type terms
Review C2M2 documentation
Install the CFDE data submission tool
Submit a Review Catalog
Review and approve/reject a Review Catalog
Authenticated access to the CFDE interface
Search/filter data sets by biosample
Search/filter data sets by project
Search/filter CF Programs by species terms
Summarize all anatomy terms hosted by CF Program X
Summarize all projects hosted by CF Program X
Summarize all subjects hosted by CF Program X
See team data submission activity
Navigate to team Review Catalogs
Compare different available team Review Catalogs
Reject/delete available team Review Catalog
Notify team data administrator there are Review Catalogs to review
View a dynamically generated set of plots
Consult documentation about Review Page
Follow a tutorial for data submission
Contact CFDE support
Preview updated Release catalog
Run QC and compliance tests
Provide feedback for approved or rejected Review Catalog
Place CFDE approved Review Catalogs in queue
Promote all queued catalogs to the Release Catalog
Summarize all biosamples hosted by CF Program X
Task to be determined
Requirements
Requirements
The interface will support GUI web access to end users
The interface will support user authentication
The interface will support the selection of an Uberon term of interest
The C2M2 model will support information relating anatomy terms to CF programs
The catalog will store information relating anatomy terms to CF programs
The interface will support the selection of an assay type term of interest
The C2M2 model will support information relating assay types to CF programs
The catalog will store information relating assay types to CF programs
The interface will support free text search of results
The catalog will store information relating projects to CF programs
The C2M2 model will support information relating projects to CF programs
The interface will render tables and plots to display filtered data
The interface will support links to original data sources within the results
The interface will support end user download of tables and figures in common formats
The interface will support the selection of a species term of interest
The C2M2 model will support information relating species terms to CF programs
The catalog will store information relating species terms to CF programs
The interface will support the selection of a CF Program of interest
The C2M2 model will support information relating FAIR metrics to CF programs
The catalog will store information relating FAIR metrics to CF programs
The interface will support the selection of a time period of interest
The C2M2 documentation is publicly available using a standard web browser and internet connection
The CFDE submission tool is publicly available
The CFDE data submission tool can be installed on a standard Mac, Windows, or Linux workstation or Linux server system
The CFDE data submission tool supports user authentication
The CFDE submission tool requires authorization to ingest data for a specific Common Fund Program
The CFDE data submission tool can ingest data in the C2M2 data model
The CFDE submission tool rejects malformed C2M2 metadata and provides comprehensible/actionable diagnostics
The interface allows data administrators to access a Review Catalog(s)
The interface allows data administrators to approve a recent candidate data release
When a recent candidate data release is approved by the data administrator, the candidate data release is marked for review by CFDE personnel
The C2M2 model will support links to original data sources
The catalog will support links to original data sources
The interface will support the selection of a biosample of interest
The C2M2 model will support information relating biosamples to CF programs
The catalog will store information relating Uberon terms to CF programs
The interface will support linking an SSO identity to an organization profile
The catalog will store information relating subjects to CF programs
The C2M2 model will support information relating subjects to CF programs
The interface will show recent submissions
The cfde ingest tool shows errors/warnings/summaries
Consult submission tool documentation
Be notified of errors when submission to Globus endpoint fails
Be notified of successful data submission
Be notified when Review Catalogs are in the Release Catalog
The C2M2 model will support information relating data types to CF programs
The catalog will store information relating data types to CF programs
requirement to be determined
Complete List of Contents
Glossary of Terms
Contributing Guide
Code of Conduct
License
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