uc-0004: Create a Data Release
Persona
p-003: Data Administrator
Objective
obj-0002: Create Data Release
Description
Jordan is a Data Administrator for a Common Fund Data Coordinating Center. They need to provide a description of the Data Coordinating Center’s data to the CFDE so that: (a) the data can be discovered by clinical researchers, (b) the data can be compared with data from other Data Coordinating Centers, and (c) they and others can see how CFDE’s metrics, statistics, and FAIRness measurements apply to the data. We assume Jordan has previously been registered with CFDE and authorized by their Data Coordinating Center to act as a data administrator on its behalf.
Jordan first reviews the documentation for the C2M2 data model and then follows a tutorial for submitting data to the CFDE portal. If they have not previously installed CFDE’s ingest tool, they do so. They then extract the required metadata from their Data Coordinating Center’s data and transform it into the C2M2 data model. Once the metadata is in the C2M2 model, they run CFDE’s submission tool to submit the metadata. When the submission completes, Jordan accesses the CFDE interface and views the results in a non-public reviewing view. If the results are not satisfactory, they adjust the metadata and re-run the ingest tool, repeating until the results are satisfactory. He can consult the documentation or CFDE support for help resolving errors.
If the results are satisfactory, they approves the data release and it is marked for review by CFDE personnel. As necessary, Jordan now knows how to submit subsequent metadata manifests for comparison.
Tasks for this use case:
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t-0017: Authenticated access to the CFDE interface ✅ September 2020
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t-0013: Review C2M2 documentation ✅ June 2020
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t-0015: Submit a Review Catalog
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t-0031: Follow a tutorial for data submission ✅ March 2021
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t-0032: Contact CFDE support
Requirements for this use case:
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r-00001: The interface will support GUI web access to end users ✅ June 2020
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r-00002: The interface will support user authentication ✅ June 2020
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r-00004: The C2M2 model will support information relating anatomy terms to CF programs ✅ June 2020
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r-00007: The C2M2 model will support information relating assay types to CF programs ✅ June 2020
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r-00011: The C2M2 model will support information relating projects to CF programs ✅ June 2020
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r-00016: The C2M2 model will support information relating species terms to CF programs ✅ June 2020
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r-00019: The C2M2 model will support information relating FAIR metrics to CF programs
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r-00022: The C2M2 documentation is publicly available using a standard web browser and internet connection ✅ October 2020
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r-00025: The CFDE data submission tool supports user authentication
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r-00026: The CFDE submission tool requires authorization to ingest data for a specific Common Fund Program
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r-00027: The CFDE data submission tool can ingest data in the C2M2 data model
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r-00029: The interface allows data administrators to access a Review Catalog(s) ✅ March 2021
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r-00030: The interface allows data administrators to approve a recent candidate data release
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r-00037: The interface will support linking an SSO identity to an organization profile ✅ September 2020
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r-99999: requirement to be determined ⏳
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r-00043: Be notified of errors when submission to Globus endpoint fails